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From Genome Analysis Wiki
Jump to navigationJump to search→Step 5: Install LocusZoom
*the LocusZoom python application
*the LocusZoom python application
*the R script used for generating plots
*the R script used for generating plots
*Human genome '''build hg18''' data, including:
*Human genome '''build hg18 and hg19''' data, including:
**genotype files (used for computing LD) from HapMap and 1000G
**genotype files (used for computing LD) from HapMap and 1000G
**a SQLite database file containing tables describing SNP positions, SNP annotations, gene and exon locations, and recombination rates
**a SQLite database file containing tables describing SNP positions, SNP annotations, gene and exon locations, and recombination rates
