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, 13:55, 7 August 2013
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| Grouping Methods : --groupFile [], --annotatedVcf [], --annotation [], | | Grouping Methods : --groupFile [], --annotatedVcf [], --annotation [], |
| --writeVcf | | --writeVcf |
− | QC Options : --hwe [0.00], --callRate [0.00] | + | QC Options : --hwe [1e-05], --callRate [0.95] |
| Association Methods : --burden, --MB, --SKAT, --VT, --condition [] | | Association Methods : --burden, --MB, --SKAT, --VT, --condition [] |
| Other Options : --tabix, --correctGC, --prefix [], --maf [0.05], | | Other Options : --tabix, --correctGC, --prefix [], --maf [0.05], |