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, 15:03, 3 April 2014
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| [http://genome.sph.umich.edu/wiki/TrioCaller:Archive Archive]. | | [http://genome.sph.umich.edu/wiki/TrioCaller:Archive Archive]. |
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| + | '''An example from sequence data to genotypes.''' |
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| The example dataset demonstrated here is also included. Our dataset consists of 40 individuals, including 10 parent-offspring trios and 10 unrelated individuals. The average sequence depth is ~3x. README.txt describes the structure of the package. Pipeline.csh (C shell) and pipeline.bash (bash shell) are two scripts for you to run all commands listed here in batch. | | The example dataset demonstrated here is also included. Our dataset consists of 40 individuals, including 10 parent-offspring trios and 10 unrelated individuals. The average sequence depth is ~3x. README.txt describes the structure of the package. Pipeline.csh (C shell) and pipeline.bash (bash shell) are two scripts for you to run all commands listed here in batch. |