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- #REDIRECT [[C++ Library: FASTQ Change Log]]43 bytes (6 words) - 01:17, 2 November 2010
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- [[Category:C++]] This class is part of [[C++ Library: libStatGen]].2 KB (237 words) - 11:02, 2 February 2017
- [[Category:C++]] ...e of next generation sequencing and genotyping data, we have created these C++ library and tools that use that library.3 KB (469 words) - 17:20, 11 September 2021
- * A software package (C++ standalone or R/C++ combined package) containing source code, binary, and example data to tes * Input Data : Training and test data at http://www.kaggle.com/c/digit-recognizer4 KB (613 words) - 23:35, 19 September 2012
- 0:1010 DETAILED 1 C 6 0 0 0 0:1011 DETAILED 1 C > 1 0 05 KB (646 words) - 17:39, 3 January 2014
- ...g to '!' unless the optional parameter --clip/-c is specified. If --clip/-c is specified, the ends will be soft clipped instead of modified. == Soft Clipping Notes (--clip/-c) ==7 KB (1,105 words) - 23:28, 12 November 2017
- cov.file <- c("study1.MetaCov.assoc.gz","study2.MetaCov.assoc.gz") score.stat.file <- c("study1.MetaScore.assoc.gz","study2.MetaScore.assoc.gz")18 KB (2,053 words) - 10:18, 18 May 2017
- The following validation criteria is used by [[C++ Class: FastQFile|FastQFile class]] and the [[fastQValidator|the FastQ Val * Base Only: A C T G N a c t g n3 KB (529 words) - 14:01, 7 September 2011
- [[Category:C++]] This class is part of [[C++ Library: libStatGen]].2 KB (322 words) - 11:05, 2 February 2017
- 2 1 0 0 1 1.0 1 34 A C A C A C A C A C 4 1 0 0 2 0.9 1 13 A C A C A C A C A C7 KB (1,065 words) - 10:34, 21 February 2017
- #'''Destination Folder''' should be '''C:\MinGW''' #The Default Destination of '''C:\msys\1.0''' is fine, so click '''Next >'''6 KB (952 words) - 12:30, 18 January 2012
- ...shErrorModel by default uses an unordered_map which is only found in C++11/C++0x. : The code attempts to automatically detect whether or not you have C++11/C++0x by checking if the gcc version > X4.3.0.4 KB (605 words) - 13:04, 23 September 2014
- cov.file <- c("example1.MetaCov.assoc.gz","example2.MetaCov.assoc.gz") score.stat.file <- c("example1.MetaScore.assoc.gz","example2.MetaScore.assoc.gz")13 KB (1,350 words) - 15:11, 29 June 2015
- * A: Use [[C++ Class: CigarRoller#Mapping Between Reference and Read/Query|Cigar::getQue These methods are found in [[C++ Class: SamFile]].2 KB (282 words) - 17:20, 11 September 2021
- ...A/A" is the homozygous reference allele, "A/C" is the heterozygous, and "C/C" is the homozygous alternative allele, where the reference and alternative ...:DGQ:DP:PL C/C:7.52:100:15:0,44,255 C/C:7.52:100:16:0,44,255 C/T:7.52:100:16:100,0,1998 KB (1,165 words) - 18:19, 11 January 2023
- Our [[C++ Library: libStatGen|libStatGen]] library reads both SAM and BAM format fi731 bytes (119 words) - 23:16, 26 February 2013
- * '''Q4: What is the genotype at this position? (T/T,C/T or C/C?) How many reads are covering this position? Is this consistent with the re 33514465 T C GT:GD:GQ:PL 1/1:3:10:117,9,06 KB (849 words) - 04:10, 23 June 2016
- * R/C++/perl/python code snipplets / toy examples of various packages ..._GitHowTo.pdf PDF presentation]], [[https://statgen.sph.umich.edu/w/images/c/c4/GitCheatSheet.pdf Cheatsheet]]2 KB (304 words) - 21:39, 17 June 2014
- baseQualityCheck [-c max record count] [-q minimumMapQuality] [-r reference] [-s dbSNP file] [-v -c -> only process first (max record count) of alignment.2 KB (372 words) - 04:35, 27 August 2010
- ...alleles or alternative alleles that are not composited of 'A', 'T', 'G', 'C', '.' alleles. <pre>MismatchRefBase 19:50578409:G-C/T4 KB (602 words) - 11:36, 2 February 2017
- 11 85576113 B681435 C CT 11 85576113 B681435 C CT5 KB (649 words) - 17:11, 23 January 2012
