Changes

From Genome Analysis Wiki
Jump to navigationJump to search
no edit summary
Line 5: Line 5:  
You can access the latest version with or without git.
 
You can access the latest version with or without git.
   −
{{#if: {{{libStatGen|}}} | Hooray...! |
+
{{#if: {{{libStatGen|}}} | A copy of libStatGen is included in certain releases of some statgen tools. |
 
If you download from github or use git to keep up to date, you also need to download our library: [[C++ Library: libStatGen|libStatGen]].
 
If you download from github or use git to keep up to date, you also need to download our library: [[C++ Library: libStatGen|libStatGen]].
   Line 16: Line 16:       −
=== Using github ===
+
=== Using Git To Track the Current Development Version ===
   −
==== Using Git To Track the Current Development Version ====
+
==== Clone (get your own copy) ====
 
  −
===== Clone (get your own copy) =====
   
You can create your own git clone (copy) using:
 
You can create your own git clone (copy) using:
 
  git clone https://github.com/statgen/{{{repoName}}}.git
 
  git clone https://github.com/statgen/{{{repoName}}}.git
Line 30: Line 28:  
Then just <code>cd {{{repoName}}}</code> and [[#Building|compile]].
 
Then just <code>cd {{{repoName}}}</code> and [[#Building|compile]].
   −
===== Get the latest Updates (update your copy) =====
+
==== Get the latest Updates (update your copy) ====
 
To update your copy to the latest version (a major advantage of using git):
 
To update your copy to the latest version (a major advantage of using git):
 
# <code>cd pathToYourCopy/{{{repoName}}}</code>
 
# <code>cd pathToYourCopy/{{{repoName}}}</code>
Line 37: Line 35:  
# <code>make all</code>
 
# <code>make all</code>
   −
=== Git Refresher ===
+
==== Git Refresher ====
 
If you decide to use git, but need a refresher, see [[How To Use Git]] or [https://statgen.sph.umich.edu/wiki/How_To_Use_Git Notes on how to use git] (if you have access)
 
If you decide to use git, but need a refresher, see [[How To Use Git]] or [https://statgen.sph.umich.edu/wiki/How_To_Use_Git Notes on how to use git] (if you have access)
      −
==== Downloading From GitHub Without Git ====
+
=== Downloading From GitHub Without Git ===
 
Periodically download the latest copy from github from the "Downloads" link on the webpage: https://github.com/statgen/bamUtil/archives/master.
 
Periodically download the latest copy from github from the "Downloads" link on the webpage: https://github.com/statgen/bamUtil/archives/master.
  

Navigation menu