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Revision as of 21:24, 24 September 2012
, 21:24, 24 September 2012→Expected output
Q-Q plot of test statistics (stratified by MAF)<br>The file out/test.b.score.epacts.qq.pdf will be generated as shown below
Q-Q plot of test statistics (stratified by MAF)<br>The file out/test.b.score.epacts.qq.pdf will be generated as shown below
[[Image:Test b score epacts qq.png]]
Manhattan Plot of Test Statistics<br>The file out/test.b.score.epacts.mh.pdf will be generated for chr20 only.
Manhattan Plot of Test Statistics<br>The file out/test.b.score.epacts.mh.pdf will be generated for chr20 only.
[[Image:Test b score epacts mh.png]]
An example Genome-wide manhattan plot (from a genome-wide run) will look like below<br><br>
An example Genome-wide manhattan plot (from a genome-wide run) will look like below<br><br>
[[Image:Tes b score epacts mh gw.png]]
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