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Revision as of 10:32, 28 September 2012
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For a list of commands available in EPACTS, type in the following commands:
For a list of commands available in EPACTS, type in the following commands:
<pre>$ epacts2/epacts help
<pre>$ epacts2.1/epacts help
Usage:
Usage:
epacts [command] [options]
epacts [command] [options]
zoom Create a locus zoom plot from epacts results
zoom Create a locus zoom plot from epacts results
meta Perform meta-analysis across multiple epacts results
meta Perform meta-analysis across multiple epacts results
make-group Create the group information for gene-based testing
make-kin Create a kinship matrix
Visit http://genome.sph.umich.edu/wiki/EPACTS for more detailed documentation
Visit http://genome.sph.umich.edu/wiki/EPACTS for more detailed documentation
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<pre>$ epacts2/epacts single -help
To view options for single variant testing only type in:
<pre>$ epacts2.1/epacts single -help
Usage:
Usage:
epacts single [options]
epacts single [options]
