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, 19:07, 19 June 2011
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| === flanking sequence filter === | | === flanking sequence filter === |
| We recommend excluding sites with >0.1% flanking 10-mer frequency among candidate sites. samtools calmd -br performs this base quality re-calibration. | | We recommend excluding sites with >0.1% flanking 10-mer frequency among candidate sites. samtools calmd -br performs this base quality re-calibration. |
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| + | == Citation == |
| + | Li Y, Sidore C, Kang HM, Boehnke M, Abecasis GR. Low-coverage sequencing: Implications for design of complex trait association studies. <em>Genome Res.</em> 2011 Jun;21(6):940-51. <br> |
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| == Questions and Comments? == | | == Questions and Comments? == |
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| Email [mailto:yunli@med.unc.edu Yun Li]. | | Email [mailto:yunli@med.unc.edu Yun Li]. |