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, 07:31, 2 February 2012
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| === (step 2) Genotype/haplotype calling using thunder [https://www.sph.umich.edu/csg/yli/thunder/thunder.V010.source.tgz thunder_glf_freq] === | | === (step 2) Genotype/haplotype calling using thunder [https://www.sph.umich.edu/csg/yli/thunder/thunder.V010.source.tgz thunder_glf_freq] === |
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− | thunder_glf_freq --shotgun my.out.$chr ----detailedInput -r 100 --states 200 --dosage --phase --interim 25 -o my.final.out | + | thunder_glf_freq --shotgun my.out.$chr --detailedInput -r 100 --states 200 --dosage --phase --interim 25 -o my.final.out |
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| Notes: | | Notes: |