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368 bytes added
, 14:13, 3 February 2012
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| Imputation : --geno, --quality, --dosage [], --probs | | Imputation : --geno, --quality, --dosage [], --probs |
| Output Files : --prefix [], --phase [], --interimInterval | | Output Files : --prefix [], --phase [], --interimInterval |
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| + | --shotgun Standard VCF 4.0 file LINK |
| + | --pedfile Pedigree file in MERLIN format LINK |
| + | --randomPhase The initial haplotypes are inferred from the single marker |
| + | --inputPhased The initial haplotypes are directly from input VCF file |
| + | --refPhased The initial haplotypes are built on reference alleles from VCF file |
| + | --interimInterval The number of rounds for interim outputs |
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