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, 14:34, 3 February 2012
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| --pedfile: Pedigree file in [http://www.sph.umich.edu/csg/abecasis/Merlin/tour/input_files.html MERLIN format] | | --pedfile: Pedigree file in [http://www.sph.umich.edu/csg/abecasis/Merlin/tour/input_files.html MERLIN format] |
| --seed: Seed for sampling, default 123456 | | --seed: Seed for sampling, default 123456 |
− | --burnin: The number of rounds ignored at the beginning in MCMC step
| + | --burnin: The number of rounds ignored at the beginning in MCMC step |
| --randomPhase: The initial haplotypes are inferred from the single marker | | --randomPhase: The initial haplotypes are inferred from the single marker |
| --inputPhased: The initial haplotypes are directly from input VCF file | | --inputPhased: The initial haplotypes are directly from input VCF file |