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, 15:17, 17 April 2013
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| ~/gotcloud/gotcloud align --conf ~/gotcloudExample/[[#Alignment Configuration File|GBR2align.conf]] --outdir [[#Alignment Output Directory|~/gotcloudTutorialOut]] --baseprefix ~/gotcloudExample | | ~/gotcloud/gotcloud align --conf ~/gotcloudExample/[[#Alignment Configuration File|GBR2align.conf]] --outdir [[#Alignment Output Directory|~/gotcloudTutorialOut]] --baseprefix ~/gotcloudExample |
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− | Upon successful completion of the alignment pipeline (about 1-2 minutes), you will see the following message: | + | Upon successful completion of the alignment pipeline (about 1-3 minutes), you will see the following message: |
| Processing finished in nn secs with no errors reported | | Processing finished in nn secs with no errors reported |
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