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Jump to navigationJump to search→STEP 4 : Run GotCloud Genotype Refinement Pipeline
gotcloud/gotcloud ldrefine --conf gotcloudExample/[[GBR60vc.conf]] --outdir gotcloudTutorialOut --numjobs 2 --baseprefix gotcloudExample
gotcloud/gotcloud ldrefine --conf gotcloudExample/[[GBR60vc.conf]] --outdir gotcloudTutorialOut --numjobs 2 --baseprefix gotcloudExample
Upon successful completion of this pipeline (about 10 minutes), you will see the following message:
Upon successful completion of this pipeline (about 3-10 minutes), you will see the following message:
Commands finished in nnn secs with no errors reported
Commands finished in nnn secs with no errors reported
