Changes

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Line 108: Line 108:  
  NA06984.recal.bam      NA06984.recal.bam.bai.done  NA06984.recal.bam.metrics  NA12878.recal.bam      NA12878.recal.bam.bai.done  NA12878.recal.bam.metrics
 
  NA06984.recal.bam      NA06984.recal.bam.bai.done  NA06984.recal.bam.metrics  NA12878.recal.bam      NA12878.recal.bam.bai.done  NA12878.recal.bam.metrics
 
  NA06984.recal.bam.bai  NA06984.recal.bam.done      NA06984.recal.bam.qemp    NA12878.recal.bam.bai  NA12878.recal.bam.done      NA12878.recal.bam.qemp
 
  NA06984.recal.bam.bai  NA06984.recal.bam.done      NA06984.recal.bam.qemp    NA12878.recal.bam.bai  NA12878.recal.bam.done      NA12878.recal.bam.qemp
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You can view the aligned sequence reads by running
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% samtools view align/bams/NA06984.recal.bam | less
    
Examine the QC metrics by
 
Examine the QC metrics by

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