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* To do conditional analysis, we just have to add --condition conditionfile, where conditionfile contains the variant that we want to condition upon in the following format:  
 
* To do conditional analysis, we just have to add --condition conditionfile, where conditionfile contains the variant that we want to condition upon in the following format:  
 +
 
   9:505484545:C:T
 
   9:505484545:C:T
 +
 
   Then extra columns of conditional analysis results will be saved in the output file "myresult/tutorial.example.QT1.meta.singlevar.results".
 
   Then extra columns of conditional analysis results will be saved in the output file "myresult/tutorial.example.QT1.meta.singlevar.results".
  
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