Changes

== Software Components ==

== Software Components ==

UMAKE pipeline consists of the following software components (details TBA)

UMAKE pipeline consists of the following software components (details TBA)

* [samtools-hybrid]

* [[samtools-hybrid]]

* [glfMerge]

* [[glfMerge]]

* [glfMultiples]

* [[glfMultiples]]

* [vcfPileup]

* [[vcfPileup]]

* [infoCollector]

* [[infoCollector]]

* [vcfCooker]

* [[vcfCooker]]

* [thunderVCF]

* [[thunderVCF]]

== Acknowledgements ==

== Acknowledgements ==

UMAKE is a result from collaborative effort by Hyun Min Kang, Goo Jun, Carlo Sidore, Paul Anderson, Mary Kate Trost, Wei Chen, Tom Blackwell, and Goncalo Abecasis. Please email to Hyun Min Kang [[mailto:hmkang@umich.edu| hmkang@umich.edu ]] for any questions.

UMAKE is a result from collaborative effort by Hyun Min Kang, Goo Jun, Carlo Sidore, Paul Anderson, Mary Kate Trost, Wei Chen, Tom Blackwell, and Goncalo Abecasis. Please email to Hyun Min Kang [[mailto:hmkang@umich.edu| hmkang@umich.edu ]] for any questions.