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''vcfRefGen''' is a tool for generating VCF reference panels for minimac imputation. It reduces VCF files by removing the info field, saving only the GT genotype field and removing any records where any kept sample is not phased or is missing a genotype.
''vcfRefGen'' is a tool for generating VCF reference panels for [http://genome.sph.umich.edu/wiki/minimac minimac imputation]. It reduces VCF files by removing the info field, saving only the GT genotype field and removing any records where any kept sample is not phased or is missing a genotype.
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