1,102
edits
Changes
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Biallelic variants involving insertions : VTYPE&INDEL&&DLEN>0&&N_ALLELE==2
Biallelic variants involving insertions : VTYPE&INDEL&&DLEN>0&&N_ALLELE==2
Biallelic variants involving 1bp variants : LEN==1&&N_ALLELE==2
Biallelic variants involving 1bp variants : LEN==1&&N_ALLELE==2
QUAL field
QUAL
FILTER fields
FILTER fields
Passed Common biallelic SNPs only : PASS&&VTYPE==SNP&&N_ALLELE==2&&INFO.AF>0.005
Passed Common biallelic SNPs only : PASS&&VTYPE==SNP&&N_ALLELE==2&&INFO.AF>0.005
Passed Common biallelic SNPs or rare indels : (PASS&&VTYPE==SNP&&N_ALLELE==2&&INFO.AF>0.005)||(VTYPE&INDEL&&INFO.AF<=0.005)
Passed Common biallelic SNPs or rare indels : (PASS&&VTYPE==SNP&&N_ALLELE==2&&INFO.AF>0.005)||(VTYPE&INDEL&&INFO.AF<=0.005)
Passed Common biallelic SNPs or rare indels : ((PASS&&VTYPE==SNP&&N_ALLELE==2&&INFO.AF>0.005)||(VTYPE&INDEL&&INFO.AF<=0.005))&&QUAL>100
with quality greater than 100
Operations
Operations
==,~,&&,||,&,|,+,-,*,/
==,~,&&,||,&,|,+,-,*,/
