Changes

=== FAQ ===

=== FAQ ===

====Reference Sequence====

====1. Reference Sequence====

   vt cannot retrieve sequences from my reference sequence file

   vt cannot retrieve sequences from my reference sequence file.

   It is common to use  reference files based on the UCSC browser's database and from the Genome Reference Consortium.

   It is common to use  reference files based on the UCSC browser's database and from the Genome Reference Consortium.

   For example, HG19 vs GrCH37.  The key difference is that chromosome 1 is represented as chr1 and 1 respectively in the  

   For example, HG19 vs GrCH37.  The key difference is that chromosome 1 is represented as chr1 and 1 respectively in the  

   FASTA files from these 2 sources.  <br>

   FASTA files from these 2 sources.  Just use the appropriate FASTA file that was used to generate your VCF file in originally.

  Just use the appropriate FASTA file that was used to generate your VCF file in originally.

== Resource Bundle ==

== Resource Bundle ==