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* External : [ftp://share.sph.umich.edu/vt resource bundle]
* External : [ftp://share.sph.umich.edu/vt resource bundle]
* Internal : /net/fantasia/home/atks/ref/vt/grch37
* Internal : /net/fantasia/home/atks/ref/vt/grch37
== FAQ ==
===1. vt cannot retrieve sequences from my reference sequence file ===
It is common to use reference files based on the UCSC browser's database and from the Genome Reference Consortium.
For example, HG19 vs Grch37. The key difference is that chromosome 1 is represented as chr1 and 1 respectively in the
FASTA files from these 2 sources. Just use the appropriate FASTA file that was used to generate your VCF file in originally.
= Maintained by =
= Maintained by =
This page is maintained by [mailto:atks@umich.edu Adrian]
This page is maintained by [mailto:atks@umich.edu Adrian]
