From Genome Analysis Wiki
Jump to navigationJump to search
3 bytes removed
, 13:46, 28 May 2015
Line 1,077: |
Line 1,077: |
| It is common to use reference files based on the UCSC browser's database and from the Genome Reference Consortium. | | It is common to use reference files based on the UCSC browser's database and from the Genome Reference Consortium. |
| For example, HG19 vs Grch37. The key difference is that chromosome 1 is represented as chr1 and 1 respectively in the | | For example, HG19 vs Grch37. The key difference is that chromosome 1 is represented as chr1 and 1 respectively in the |
− | FASTA files from these 2 sources. Just use the appropriate FASTA file that was used to generate your VCF file in originally. | + | FASTA files from these 2 sources. Just use the appropriate FASTA file that was used to generate your VCF file originally. |
| | | |
| = Maintained by = | | = Maintained by = |
| | | |
| This page is maintained by [mailto:atks@umich.edu Adrian] | | This page is maintained by [mailto:atks@umich.edu Adrian] |