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-o defines the out file which and has the STDOUT set as the default.
-o defines the out file which and has the STDOUT set as the default.
You may modify the STDOUT to output the binary version of the format.
You may modify the STDOUT to output the binary version of the format.
== Alternate headers ==
As BCF is a restrictive format of VCF where all meta data must be present in the header,
vt provides a mechanism to read an alternative header for VCF files that do not have a
complete header. Simply provide a header file stub named as <vcf-file>.hdr and vt
will automatically read it instead of the original header in <vcf-file>.
== VCF Manipulation ==
== VCF Manipulation ==
