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• LibStatGen Repository
  '''The contents of this page have been merged into [[C++ Library: libStatGen]]'''
  81 bytes (13 words) - 15:24, 23 August 2011
• Makefile.tool
  == Example Contents of Makefile.tool ==
  1 KB (245 words) - 17:20, 28 March 2011
• StringMap.h
  ...ion so that inserts and deletes can be quite expensive. If access to class contents ''in order'' is *not required*, a [[StringHash.h]] might be much more effic
  357 bytes (57 words) - 03:31, 26 November 2009
• Mantra.cpp
  To interpret the contents of an instance of the Mantra class, first assign each individual in the ped ...xample, consider a pedigree with two siblings and two parents. The initial contents of Mantra::vector and Mantra::state might be:
  3 KB (383 words) - 15:09, 8 December 2009
• C++ Class: Pedigree Example
  // The data file contains a description of the contents of the
  2 KB (241 words) - 16:37, 13 April 2010
• METAL CUSTOMVARIABLE
  METAL '''CustomVariables''' are user specified columns whose contents are
  834 bytes (125 words) - 00:24, 6 April 2010
• Using Git Example
  # Look at the contents of the bare repository # Look at the contents (Note: learningGit has not yet had any files added to it)
  15 KB (2,368 words) - 17:51, 12 July 2011
• Tutorial: RAREMETAL
  ...ribed in a pair of pedigree and data files; you can get a summary of their contents using pedstats. ...red in a VCF file. The VCF is a text format, so you can try to peek at the contents if you like.
  7 KB (1,000 words) - 17:51, 16 March 2018
• ExomePicks
  The data file describes the contents of the pedigree file and should include, minimally, an entry to specify whi '''< contents of small.dat >'''
  7 KB (964 words) - 10:01, 2 February 2017
• BAM Review Action Items
  *** Does that solve the problem? Won't the contents change when a new one is read? Is that what we want? // It does NOT clear the current contents of header.
  10 KB (1,400 words) - 12:01, 2 February 2017
• BamUtil: bam2FastQ
  ! Output File Contents !! Extension !! Output File Contents !! Extension
  13 KB (1,798 words) - 23:53, 5 March 2016
• TrioCaller
  alignment of each short read to the genome. You can view the contents contain to help describe their contents (for example, to specify that this file contains
  15 KB (2,470 words) - 18:01, 19 May 2015
• Understanding vcf-summary output
  * In the first part, each SNP is counted only once, grouped by the contents of FILTER column.
  5 KB (800 words) - 22:31, 23 November 2014
• MaCH: 1000 Genomes Imputation Cookbook
  ...ypes between your sample and the reference panel (in a ''.err'' file). The contents of the second file reflect the combined effects of genotyping error and dif
  6 KB (896 words) - 03:08, 28 July 2011
• BamUtil: dumpAsp
  The <code>dumpAsp</code> option on the [[bamUtil]] executable prints the contents of an [[LibStatGen: ASP|ASP]] file in a readable format to stdout.
  5 KB (646 words) - 17:39, 3 January 2014
• Tutorial: Low Pass Sequence Analysis
  ...ith gzip but, since fastq is a simple text format, you can easily view the contents of the files using a command like: You can view the contents of the alignment at any location using the <code>samtools view</code>
  18 KB (2,867 words) - 03:59, 17 September 2019
• MaCH: Input Files
  ...files. The two files are intrinsically linked, the data file describes the contents of the pedigree file (every pedigree file is slightly different) and the pe
  7 KB (1,251 words) - 11:31, 2 February 2017
• METAL Quick Start
  ...ile is to look at the accompanying ''.info'' file. This file describes the contents of each column.
  18 KB (2,804 words) - 13:11, 5 April 2010
• Biostatistics 615/815: Main Page
  The following contents are planned to be covered.
  8 KB (1,077 words) - 21:53, 18 December 2012
• Biostatistics 615/815 Fall 2011
  The following contents are planned to be covered.
  11 KB (1,312 words) - 17:35, 31 August 2012

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