LibStatGen: general: Difference between revisions

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= libcsg =
[[Category:C++]]
This library contains utility classes that are useful for many of the other developed software programs/libraries.
[[Category:libStatGen]]
[[Category:libStatGen general]]


See [[C++ Library: libcsg Change Log]] for a list of the most recent updates to the library.
= general =
This directory of the libStatGen library contains utility classes that are useful for many of the other developed software programs/library directories.


=== Classes in the FastQFile Library ===
See [[C++ Library: libStatGen]] for more descirption on the library.
 
== Classes in general ==
 
=== Basic Programming Classes ===
{| style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
{| style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
|-style="background: #f2f2f2; text-align: center;"
|-style="background: #f2f2f2; text-align: center;"
! Class Name !!  Description
! Class Name !!  Description
|-
|-
| <code>String (StringBasics.cpp/h)</code>
| <code>[http://csg.sph.umich.edu/csg/mktrost/doxygen/current/classString.html String (StringBasics.cpp/h)]</code>
| String class for string operations
| String class for string operations
|-
|-
| <code>[[C++ Class: BaseAsciiMap|BaseAsciiMap]]</code>
| <code>[[C++ Class: InputFile|InputFile]]</code>
| Class for opening and operating on a file.
|-
| ***OTHERS***
| ***NEED TO BE ADDED TO THIS LIST***
|}
 
=== Genetics Based Classes ===
{| style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
|-style="background: #f2f2f2; text-align: center;"
! Class Name !!  Description
|-
| <code>[http://csg.sph.umich.edu//mktrost/doxygen/current/classBaseUtilities.html BaseUtilities]</code>
| Class containing static utilities for performing basic operations on bases.
|-
| <code>[http://csg.sph.umich.edu//mktrost/doxygen/current/classBaseAsciiMap.html BaseAsciiMap]</code>
| Class for determining if a character is a valid base.
| Class for determining if a character is a valid base.
|-
|-
| <code>InputFile</code>
| <code>[[C++ Class: CigarRoller|Cigar/CigarRoller]]</code>
| Class for opening and operating on a file.
| Utility classes for generating/processing CIGAR strings.
|-
| ***OTHERS***
| ***NEED TO BE ADDED TO THIS LIST***
|}
|}


== Suggested Improvements/Features ==
== Suggested Improvements/Features ==

Latest revision as of 10:51, 2 February 2017


general

This directory of the libStatGen library contains utility classes that are useful for many of the other developed software programs/library directories.

See C++ Library: libStatGen for more descirption on the library.

Classes in general

Basic Programming Classes

Class Name Description
String (StringBasics.cpp/h) String class for string operations
InputFile Class for opening and operating on a file.
***OTHERS*** ***NEED TO BE ADDED TO THIS LIST***

Genetics Based Classes

Class Name Description
BaseUtilities Class containing static utilities for performing basic operations on bases.
BaseAsciiMap Class for determining if a character is a valid base.
Cigar/CigarRoller Utility classes for generating/processing CIGAR strings.
***OTHERS*** ***NEED TO BE ADDED TO THIS LIST***

Suggested Improvements/Features

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