User contributions for Ppwhite
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21 February 2017
- 16:0816:08, 21 February 2017 diff hist +10 Thunder →(step 2) Genotype/haplotype calling using thunder thunder_glf_freq current
- 16:0616:06, 21 February 2017 diff hist −2 Thunder →(step 2) Genotype/haplotype calling using thunder thunder_glf_freq
- 14:3414:34, 21 February 2017 diff hist −4 Famrvtest →PED and DAT Files current
2 February 2017
- 16:0316:03, 2 February 2017 diff hist −3 CalcMatch →Download current
- 16:0216:02, 2 February 2017 diff hist 0 MaCH: machX No edit summary current
- 16:0116:01, 2 February 2017 diff hist −3 BAM Review Action Items →Accessing String Values current
- 16:0016:00, 2 February 2017 diff hist −4 C++ Class: CigarRoller →Cigar current
- 15:5815:58, 2 February 2017 diff hist −6 VcfCodingSnps No edit summary current
- 15:5715:57, 2 February 2017 diff hist −3 TabAnno →Contact current
- 15:5515:55, 2 February 2017 diff hist −21 TabAnno →Quick tutorial
- 15:5315:53, 2 February 2017 diff hist −3 UMAKE →Exercise with Example Resources current
- 15:5115:51, 2 February 2017 diff hist −3 LASER →Advanced options current
- 15:4215:42, 2 February 2017 diff hist −9 QPLOT →Source Code Distribution current
- 15:4115:41, 2 February 2017 diff hist −3 QPLOT →Binary Download
- 15:3615:36, 2 February 2017 diff hist −3 CheckVCF.py →Download current
- 15:3515:35, 2 February 2017 diff hist −3 Rare variant tests →Summary of rare variant tests for sequence data current
- 15:3415:34, 2 February 2017 diff hist −3 SplitRef →Download current
- 15:3315:33, 2 February 2017 diff hist −3 SplitPed →Download current
- 15:3315:33, 2 February 2017 diff hist −6 SplitPed →Required Input Files
- 15:3115:31, 2 February 2017 diff hist −6 CalcMatch No edit summary
- 15:3115:31, 2 February 2017 diff hist −3 MaCH: Input Files →Optional Phased Haplotypes current
- 15:3015:30, 2 February 2017 diff hist −3 MaCH: Input Files →Optional Phased Haplotypes
- 15:2915:29, 2 February 2017 diff hist −6 MaCH: Input Files No edit summary
- 15:2815:28, 2 February 2017 diff hist −3 MaCH: machX →Reference Haplotypes
- 15:2815:28, 2 February 2017 diff hist −3 MaCH: machX →Your Own Data
- 15:2715:27, 2 February 2017 diff hist −3 Thunder →Ligate Haplotypes
- 15:2715:27, 2 February 2017 diff hist −3 Thunder →Example Showing the Whole Pipeline
- 15:2615:26, 2 February 2017 diff hist −9 Thunder →(step 2) Genotype/haplotype calling using thunder thunder_glf_freq
- 15:2515:25, 2 February 2017 diff hist −3 Thunder →(step 1) Site promotion using software glfMultiples GPT_Freq
- 15:2415:24, 2 February 2017 diff hist −3 Mach DAC →Post Phasing/Imputation Ligation current
- 15:2415:24, 2 February 2017 diff hist −3 Mach DAC →Phasing/Imputation with External Reference
- 15:2415:24, 2 February 2017 diff hist −3 Mach DAC →Split Your Data
- 15:2215:22, 2 February 2017 diff hist −3 MaCH FAQ →How do I get imputation quality estimates? current
- 15:2215:22, 2 February 2017 diff hist −6 MaCH FAQ →How do I get imputation quality estimates?
- 15:2115:21, 2 February 2017 diff hist −3 MaCH FAQ →Install MaCH
- 15:2115:21, 2 February 2017 diff hist −3 MaCH FAQ →How do I get reference files for an region of interest?
- 15:2015:20, 2 February 2017 diff hist −3 MaCH FAQ →How do I interpret the imputation quality estimates?
- 15:2015:20, 2 February 2017 diff hist −3 MaCH FAQ →Where can I find HapMap III / 1000 Genomes reference files?
- 15:2015:20, 2 February 2017 diff hist −3 MaCH FAQ →Where can I find combined HapMap reference files?
- 15:1915:19, 2 February 2017 diff hist −3 MaCH FAQ →minimac
- 15:1415:14, 2 February 2017 diff hist −6 TrioCaller:Archive No edit summary current
- 15:1115:11, 2 February 2017 diff hist −3 RareSimu →Download current
- 15:1115:11, 2 February 2017 diff hist −4 BamGenotypeCheck →Download bamGenotypeCheck current
- 15:1015:10, 2 February 2017 diff hist −4 Karma →Download Karma current
- 15:0915:09, 2 February 2017 diff hist −3 Template:SeqShopExtSetup →Download the Workshop Example Data current
- 15:0715:07, 2 February 2017 diff hist −3 SeqShop: Sequence Mapping and Assembly Practical, June 2014 →Download the example data current
- 15:0615:06, 2 February 2017 diff hist −6 BAM Review Action Items →Useful Links
- 15:0515:05, 2 February 2017 diff hist −3 C++ Class: SamFileHeader →Sam Header Basics current
- 15:0415:04, 2 February 2017 diff hist −3 C++ Class: SamFileHeader →Sam Header Basics
- 15:0315:03, 2 February 2017 diff hist −3 C++ Class: SamFile →SamFileWriter current