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Line 30: Line 30:  
  python $LASER/pileup2seq/pileup2seq.py \
 
  python $LASER/pileup2seq/pileup2seq.py \
 
  -m $HGDP/HGDP_938.site \
 
  -m $HGDP/HGDP_938.site \
  -o $OUT/ancestry/$SAMPLE.laser \
+
  -o $OUT/ancestry/$SAMPLE.HGDP \
  $OUT/ancestry/$SAMPLE.recal.pileup
+
  $OUT/ancestry/$SAMPLE.HGDP.pileup
    
This step takes just a few seconds.
 
This step takes just a few seconds.
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