Difference between revisions of "SeqShop: May 2015"

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| [[Media:seqshop_dec14_day2_snp_lecture_v2.pdf|Variant Calling and Filtering for SNPs]]
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| [[Media:seqshop_may_2015_day2_snp_lecture_v2.pdf|Variant Calling and Filtering for SNPs]]
 
| [[SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015|SeqShop: Variant Calling and Filtering for SNPs Practical]]
 
| [[SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015|SeqShop: Variant Calling and Filtering for SNPs Practical]]
 
| rowspan="2"|''[[SeqShop: Calling Your Own Genome, May 2015|SeqShop: Calling Your Own Genome]]''
 
| rowspan="2"|''[[SeqShop: Calling Your Own Genome, May 2015|SeqShop: Calling Your Own Genome]]''

Revision as of 22:30, 18 May 2015

Sequence Analysis Workshop May 18-22, 2015: http://seqshop.sph.umich.edu/

Course Agenda: http://seqshop.sph.umich.edu/index.php/course-agenda


Monday Lecture Practical Own Genome Analysis
Brief Introduction and Background SeqShop: Quick intro to Linux SeqShop: Aligning Your Own Genome
Design of Human Genetic Studies SeqShop: Sequence Mapping and Assembly Practical
Sequence Mapping and Assembly iobio: Visualizing BAM statistics
Tuesday Lecture Practical Own Genome Analysis
Variant Calling and Filtering for SNPs SeqShop: Variant Calling and Filtering for SNPs Practical SeqShop: Calling Your Own Genome
Analysis of Structural Variation - Part 1

Analysis of Structural Variation - Part 2

SeqShop: Analysis of Structural Variation Practical
Wednesday Lecture Practical Own Genome Analysis
Variant Calling and Filtering for INDELs SeqShop: Variant Calling and Filtering for INDELs Practical SeqShop: Calling Your Own Genome
Thursday Lecture Practical Own Genome Analysis
Estimates of Genetic Ancestry SeqShop: Estimates of Genetic Ancestry Practical
Genetic Association Analysis SeqShop: Association Analysis
Friday Lecture Practical Own Genome Analysis
Summary SeqShop: Ancestry On Your Own Genome