User contributions for Cristen

24 September 2014

• 09:5409:54, 24 September 2014 diff hist +115 GREGOR →Configuration File

23 April 2013

• 11:3411:34, 23 April 2013 diff hist +79 LocusZoom →Uploading Your Association Study Results

11 December 2012

• 11:5711:57, 11 December 2012 diff hist +30 LocusZoom →Uploading Your Association Study Results

25 May 2011

• 11:1611:16, 25 May 2011 diff hist −2 METAL Documentation →Specifying Weights in P-value Based Analysis
• 11:1511:15, 25 May 2011 diff hist +76 METAL Documentation →Specifying Weights in P-value Based Analysis
• 11:1411:14, 25 May 2011 diff hist +167 METAL Documentation →Specifying Weights in P-value Based Analysis

6 March 2011

• 23:2023:20, 6 March 2011 diff hist −1 LocusZoom Standalone →Specify a specific region and reference SNP to plot
• 23:1923:19, 6 March 2011 diff hist −1 LocusZoom Standalone →LocusZoom options
• 23:1923:19, 6 March 2011 diff hist +27 LocusZoom Standalone →Batch mode

4 February 2011

• 21:4821:48, 4 February 2011 diff hist −248 Rare variant tests →Summary of rare variant tests for sequence data
• 21:4721:47, 4 February 2011 diff hist +1,464 Rare variant tests →Summary of rare variant tests for sequence data
• 21:4421:44, 4 February 2011 diff hist +2,063 Rare variant tests →Summary of rare variant tests for sequence data
• 21:2721:27, 4 February 2011 diff hist +33 Rare variant tests →Summary of rare variant tests for sequence data
• 21:2521:25, 4 February 2011 diff hist +2,425 Rare variant tests →Summary of rare variant tests for sequence data
• 21:0521:05, 4 February 2011 diff hist +998 N Rare variant tests Created page with '=== Summary of rare variant tests for sequence data === Compiled by Cristen Willer and Suzanne Leal for the ESP Feb 1, 2011 * indicates applicability to quantitative data ? i…'

10 September 2010

• 05:3905:39, 10 September 2010 diff hist +13 LocusZoom →Commonly Used LocusZoom Options

10 June 2010

• 15:5915:59, 10 June 2010 diff hist +117 LocusZoom →Plotting of Pairwise Linkage Disequilibrium

7 June 2010

• 12:3212:32, 7 June 2010 diff hist −1 LocusZoom →Commonly Used LocusZoom Options
• 12:3112:31, 7 June 2010 diff hist +175 LocusZoom →Commonly Used LocusZoom Options
• 11:1211:12, 7 June 2010 diff hist −1 LocusZoom No edit summary
• 11:1211:12, 7 June 2010 diff hist +2 LocusZoom No edit summary
• 11:1111:11, 7 June 2010 diff hist −177 LocusZoom No edit summary
• 11:1111:11, 7 June 2010 diff hist +12 LocusZoom No edit summary
• 11:1111:11, 7 June 2010 diff hist +247 LocusZoom No edit summary
• 11:0711:07, 7 June 2010 diff hist +90 LocusZoom Standalone →Quick Start (Requirements)
• 11:0711:07, 7 June 2010 diff hist +855 LocusZoom Standalone →Input
• 11:0611:06, 7 June 2010 diff hist −850 LocusZoom Standalone →Step 4: Install LocusZoom
• 11:0511:05, 7 June 2010 diff hist −69 LocusZoom Standalone →Step 4: Install LocusZoom
• 11:0511:05, 7 June 2010 diff hist +402 LocusZoom Standalone →Step 4: Install LocusZoom
• 11:0011:00, 7 June 2010 diff hist +129 LocusZoom Standalone →Requirements

6 June 2010

• 09:4009:40, 6 June 2010 diff hist −1 LocusZoom Standalone →Creating a SQLite database
• 09:3909:39, 6 June 2010 diff hist 0 LocusZoom Standalone →Use hapmap YRI for LD
• 09:3909:39, 6 June 2010 diff hist +17 LocusZoom Standalone →Use 1000 genomes, CEU for LD instead of the default
• 09:3809:38, 6 June 2010 diff hist −158 LocusZoom Standalone →Plotting options
• 09:3309:33, 6 June 2010 diff hist +35 LocusZoom Standalone →Region
• 09:3109:31, 6 June 2010 diff hist −1 LocusZoom Standalone →Region
• 09:3109:31, 6 June 2010 diff hist 0 LocusZoom Standalone →Association results file ("metal" file)
• 09:2809:28, 6 June 2010 diff hist +1 LocusZoom Standalone →Step 4: Install LocusZoom
• 09:2709:27, 6 June 2010 diff hist −25 LocusZoom Standalone →Step 4: Install LocusZoom
• 09:2609:26, 6 June 2010 diff hist +30 LocusZoom Standalone →Step 4: Install LocusZoom
• 09:2509:25, 6 June 2010 diff hist −3 LocusZoom Standalone →Step 4: Install LocusZoom
• 09:2509:25, 6 June 2010 diff hist +509 LocusZoom Standalone →Step 4: Install LocusZoom

14 May 2010

• 15:2115:21, 14 May 2010 diff hist +1,524 LocusZoom →Upload your own meta-analysis file and generate single plots using a web-based form
• 15:0515:05, 14 May 2010 diff hist +24 LocusZoom →Generate single plots using our publicly-available lipids GWAS data

28 March 2010

• 22:1922:19, 28 March 2010 diff hist +1 METAL Documentation →Example: A METAL Meta-Analysis Script
• 22:1722:17, 28 March 2010 diff hist +34 METAL Documentation →Tracking Allele Frequencies
• 22:0622:06, 28 March 2010 diff hist +59 METAL Documentation →Performing the Final Analysis
• 22:0522:05, 28 March 2010 diff hist +36 METAL Documentation →Specifying Weights in P-value Based Analysis
• 22:0322:03, 28 March 2010 diff hist −14 METAL Documentation →Input File Separators
• 22:0222:02, 28 March 2010 diff hist +46 METAL Documentation →Approach