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Revision as of 21:44, 15 June 2014
, 21:44, 15 June 2014→Accessing BAMs by Position
==== Accessing BAMs by Position ====
==== Accessing BAMs by Position ====
BAM's are so big, what if we want to see a position part way through the file?
BAM's are so big, what if we want to see a position part way through the file?
*[http://samtools.sourceforge.net/samtools.shtml#3 samtools] has an option for that.
Add a region to the view command we used above. Let's find all reads that overlap positions 36907000-36907005:
Add a region to the view command we used above. Let's find all reads that overlap positions 36907000-36907005:
