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Revision as of 21:41, 18 June 2014
, 21:41, 18 June 2014→Estimating ancestry coordinates using LASER
-b and -i are optional.
-b and -i are optional.
== Estimating ancestry coordinates using LASER ==
== Estimating ancestry coordinates ==
Step 0: Generate the reference ancestry space (using the PCA mode of the LASER program)
Step 0: Generate the reference ancestry space (using the PCA mode of the LASER program)
YRI NA19240 95866 0.213874 20 0.999748 469.914 -214.94 -14.9923 -13.6559
YRI NA19240 95866 0.213874 20 0.999748 469.914 -214.94 -14.9923 -13.6559
== Visualizing results ==
Example R codes are available in ./LASER-2.01/plot/. Let's first copy the folder to current working directory:
Example R codes are available in ./LASER-2.01/plot/. Let's first copy the folder to current working directory:
