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Revision as of 16:04, 25 June 2014
, 16:04, 25 June 2014→Reference Files
Remember, use <code>'q'</code> to exit out of <code>less</code>
Remember, use <code>'q'</code> to exit out of <code>less</code>
q
q
; Where is the reference sequence?
; Where is the reference sequence?
</ul>
</ul>
</ul>
</ul>
If you want to access the FASTA file by position, you can use <code>samtools faidx</code> command
${GC}/bin/samtools faidx ${SS}/ref22/human.g1k.v37.chr22.fa 22:36000000 | less
or
${GC}/bin/samtools faidx ${SS}/ref22/human.g1k.v37.chr22.fa 22:36000000-36000100
=== GotCloud FASTQ Index File ===
=== GotCloud FASTQ Index File ===
