Changes

SardiNIA (view source)

32 bytes added , 11:44, 27 June 2016

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**** /net/sardinia/progenia/SardiNIA/VariantCalling_20150330/INDELCALL/filterIndels/FINAL/all.genotypes.PASS.vcf.gz

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* Merged Indel VCF with beagles SNP VCF, then sorted to get the following VCFS:

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* Merged Indel VCF with beagles SNP VCF, then sorted to get the following VCFS:

** /net/sardinia/progenia/SardiNIA/VariantCalling_20150330/SNPINDEL/chr*.PASS.beagled.vcf.gz

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* Indel and SNP VCFs that have been combined AND BEAGLED AGAIN TOGETHER using Beagle4:

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* Indel and SNP VCFs that have been combined AND BEAGLED AGAIN TOGETHER using Beagle4. '''These are the latest VCFS''':

** /net/sardinia/progenia/SardiNIA/VariantCalling_20150330/SNPINDEL/beagle4/beagle4_chr*/beagle4/chr*/chr*.filtered.PASS.beagled.vcf.gz

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