From Genome Analysis Wiki
Jump to navigationJump to search
5 bytes added
, 15:47, 26 October 2012
Line 143: |
Line 143: |
| === Primary analyses === | | === Primary analyses === |
| | | |
− | There are '''2''' separate association analyses to be completed '''without adjusting for BMI'''. | + | There are '''2''' separate association analyses to be completed '''without adjusting for BMI'''. |
| | | |
| {| width="1650" border="1" align="left" cellpadding="1" cellspacing="1" | | {| width="1650" border="1" align="left" cellpadding="1" cellspacing="1" |
Line 166: |
Line 166: |
| [http://genome.sph.umich.edu/wiki/EPACTS_for_DIAGRAM#A._Typical_DIAGRAM_analysis_using_existing_association_pipeline 1. Typical DIAGRAM analysis using existing association pipeline] | | [http://genome.sph.umich.edu/wiki/EPACTS_for_DIAGRAM#A._Typical_DIAGRAM_analysis_using_existing_association_pipeline 1. Typical DIAGRAM analysis using existing association pipeline] |
| | | |
− | <br> | + | <br> |
| | | |
| | | | | |
Line 184: |
Line 184: |
| DIAGRAMv4_iSNPs_XXX_1000G_KKK_TTT_YYY_ZZZ.txt | | DIAGRAMv4_iSNPs_XXX_1000G_KKK_TTT_YYY_ZZZ.txt |
| | | |
− | <br> | + | <br> |
| | | |
| |- | | |- |
Line 190: |
Line 190: |
| [http://genome.sph.umich.edu/wiki/EPACTS_for_DIAGRAM#C._Analysis_of_low_frequency_variants_using_Firth_bias-corrected_logistic_regression 2. Analysis of low frequency variants using Firth bias-corrected logistic regression] | | [http://genome.sph.umich.edu/wiki/EPACTS_for_DIAGRAM#C._Analysis_of_low_frequency_variants_using_Firth_bias-corrected_logistic_regression 2. Analysis of low frequency variants using Firth bias-corrected logistic regression] |
| | | |
− | <br> | + | <br> |
| | | |
| | | | | |
Line 206: |
Line 206: |
| DIAGRAMv4_iSNPs_XXX_1000G_KKK_FBC_YYY_ZZZ.epacts.gz | | DIAGRAMv4_iSNPs_XXX_1000G_KKK_FBC_YYY_ZZZ.epacts.gz |
| | | |
− | <br> | + | <br> |
| | | |
| |} | | |} |