235
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to searchGotCloud: Variant Calling Pipeline (view source)
Revision as of 22:11, 27 March 2013
, 22:11, 27 March 2013→Example Configuration File
== Example Configuration File ==
== Example Configuration File ==
Example Configuration file where reference files are stored in /path/reference, and bams in path/freeze5
Example Configuration file where reference files are stored in /path/reference, and bam index file in path/freeze5
CHRS = 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
CHRS = 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
BAM_INDEX = /path/freeze5/freeze5.bam.index
BAM_INDEX = /path/freeze5/freeze5.bam.index
