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Tutorial: EMMAX GotCloud STOM: Lecture 5

7 bytes removed, 02:31, 6 January 2014
Preparing Input Files
* Configuration File - See the example configuration file below.
% cat $S5/examples/index/chr7.CFTR.align.conf�conf
�INDEX_FILE INDEX_FILE = index/chr7.CFTR.fastq.index
###################
# References
Default options should be mostly fine in many other cases. In this example, because it is not genome-wide calling, reference files are modified to be chr7-specific
 
=== Run GotCloud Alignment Pipeline ===

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