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== NOTE ==
== NOTE ==
If you are interested in calling de novo mutations in trios based on VCF file, we recommend our new tool, triodenovo, which implemented a nicer algorithm with a more natural interpretation of the de novo quality. Please check it out following the link below. Thanks!
If you are interested in calling '''''de novo''''' mutations in '''trios''' based on '''VCF''' files, we recommend our new tool, triodenovo, which implemented a nicer algorithm with a more natural interpretation of the ''''''de novo''''' quality. Please check it out following the link below. Thanks for trying it out!
http://genome.sph.umich.edu/wiki/Triodenovo
http://genome.sph.umich.edu/wiki/Triodenovo
== Updates ==
== Updates ==
The latest version of 0.17 is available for [[#Download | Download]].
The latest version of 0.18 is available for [[#Download | Download]].
v0.18 fixed a bug when it reported inbreeding for some pedigrees which are not inbreeding families
v0.17 fixed a bug when some of the samples in the per files are not in the input vcf file
v0.17 fixed a bug when some of the samples in the per files are not in the input vcf file
== Download ==
== Download ==
The latest version of source code v0.17 with test files can be [[Media:Polymutt.0.17.tar.gz | downloaded]] here.
The latest version of source code v0.18 with test files can be [[Media:Polymutt.0.18.tar.gz | downloaded]] here.
== Contact ==
== Contact ==
