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, 10:12, 27 April 2014
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| == NOTE == | | == NOTE == |
− | If you are interested in calling de novo mutations in trios based on VCF file, we recommend our new tool, triodenovo, which implemented a nicer algorithm with a more natural interpretation of the de novo quality. Please check it out following the link below. Thanks! | + | If you are interested in calling '''''de novo''''' mutations in '''trios''' based on '''VCF''' files, we recommend our new tool, triodenovo, which implemented a nicer algorithm with a more natural interpretation of the ''''''de novo''''' quality. Please check it out following the link below. Thanks for trying it out! |
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| http://genome.sph.umich.edu/wiki/Triodenovo | | http://genome.sph.umich.edu/wiki/Triodenovo |
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| == Updates == | | == Updates == |
− | The latest version of 0.17 is available for [[#Download | Download]]. | + | The latest version of 0.18 is available for [[#Download | Download]]. |
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| + | v0.18 fixed a bug when it reported inbreeding for some pedigrees which are not inbreeding families |
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| v0.17 fixed a bug when some of the samples in the per files are not in the input vcf file | | v0.17 fixed a bug when some of the samples in the per files are not in the input vcf file |
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| == Download == | | == Download == |
− | The latest version of source code v0.17 with test files can be [[Media:Polymutt.0.17.tar.gz | downloaded]] here. | + | The latest version of source code v0.18 with test files can be [[Media:Polymutt.0.18.tar.gz | downloaded]] here. |
− | A precompiled version of 0.14 on Ubuntu 10.04 (works on CentOS 6.3 as well) is available for [[Media:polymutt.0.14.precompiled.tar.gz | download]]
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| == Contact == | | == Contact == |