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Revision as of 10:33, 17 June 2014
, 10:33, 17 June 2014→Comparison with other data sets
We perform the same analysis for the failed variants again, the relatively low overlap with known data sets imply a reasonable tradeoff in sensitivity and specificity.
We perform the same analysis for the failed variants again, the relatively low overlap with known data sets imply a reasonable tradeoff in sensitivity and specificity.
${GC}/bin/vt profile_indels -g indel.reference.txt -r hs37d5.fa all.genotypes.bcf -i 22:36000000-37000000 -f "~PASS"
${GC}/bin/vt profile_indels -g ${VTREF}/indel.reference.txt -r ${REF}/human.g1k.v37.chr22.fa ${OUT}/final/all.genotypes.vcf.gz -i 22:36000000-37000000 -f "~PASS"
data set
data set
