User contributions
8 January 2016
Using Gotcloud on Flux
How to run Gotcloud on Flux
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Using Gotcloud on Flux
Running Gotcloud on Flux
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Using Gotcloud on Flux
Next, prepare to use the Flux/Torque/PBS cluster
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Using Gotcloud on Flux
Next, prepare to use the Flux/Torque/PBS cluster
+1
Using Gotcloud on Flux
Next, prepare to use the Flux/Torque/PBS cluster
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Using Gotcloud on Flux
Next, prepare to use the Flux/Torque/PBS cluster
-33
Using Gotcloud on Flux
Created page with "__TOC__ ==Running Gotcloud on Flux== ===First, Configure GotCloud like you would anywhere else=== 1. Install GotCloud somewhere as instructed GotCloud#GotCloud_Setup_on_A..."
Talk:GotCloud
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Talk:GotCloud
Organization of the GotCloud pages on this wiki
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Talk:GotCloud
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Talk:GotCloud
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Talk:GotCloud
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+1,287
7 January 2016
Talk:GotCloud
no edit summary
+339
Talk:GotCloud
Created page with "==Organization of the GotCloud pages on this wiki== The main page is http://genome.sph.umich.edu/wiki/GotCloud . Setup pages: * http://genome.sph.umich.edu/wiki/GotCloud:_Bi..."
GotCloud: Binary Releases
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+25
GotCloud: Binary Releases
GotCloud Binary Releases
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GotCloud: Binary Releases
no edit summary
+12
15 December 2015
6 November 2015
31 October 2015
29 October 2015
Releasing GotCloud
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+8
Releasing GotCloud
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+36
Releasing GotCloud
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Releasing GotCloud
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-36
Releasing GotCloud
no edit summary
-2
27 October 2015
BamUtil: clipOverlap
Overview of the clipOverlap function of bamUtil: grammar/usage.
+22
BamUtil: clipOverlap
Overview of the clipOverlap function of bamUtil: Fix broken link.
m-13
2 October 2015
28 September 2015
11 September 2015
8 September 2015
1 September 2015
Git FAQs
Subtrees: Format code.
m-18
Git FAQs
Subtrees: Format instructions for using git subtrees
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GotCloud
Running GotCloud Software: Remove broken links. Update pipeline status.
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31 August 2015
GotCloud: Creating a New Pipeline
Command Line Parameters: fix formatting about BAM_LIST
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GotCloud: Creating a New Pipeline
Overall Pipeline Definition: spelling
mGotCloud: Amazon
matching parenthesis
m+1
25 August 2015
SeqShop: Estimates of Genetic Ancestry Practical, May 2015
Step 1: bam --> pileup: add # to command line
mSeqShop: Analysis of Structural Variation Practical, May 2015
Undo revision 13683 by Pjvh (talk) revert all changes involving `--list bam.list`
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24 August 2015
SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP 3rd-party Site Genotyping/Filtering Pipeline: split long command line
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SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP 3rd-party Site Genotyping/Filtering Pipeline: add `--list bams/bam.list` to the 3rd command
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SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP Genotyping Pipeline: add `--list bams/bam.list` to the next gotcloud command
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SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP Discovery Pipeline: add missing dash
m+1
SeqShop: Analysis of Structural Variation Practical, May 2015
Running GotCloud/GenomeSTRiP Discovery Pipeline: tell gotcloud where bam.list is, which is now required.
+127
19 August 2015
User:Pjvh
no edit summary
+31
User:Pjvh
Blanked the page
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SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015
Filtered VCF: since the uncompressed vcf isn't created, use zless on the compressed
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SeqShop: Sequence Mapping and Assembly Practical, May 2015
Download & Build GotCloud: update to gotcloud-1.17.4
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