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, 14:28, 31 August 2015
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| * NO_CRAM - do not allow CRAM files as input | | * NO_CRAM - do not allow CRAM files as input |
| * MAKE_BASE_NAME_PIPE - base makefile name | | * MAKE_BASE_NAME_PIPE - base makefile name |
− | * MAKE_OPTS - otpions to pass to the make command that runs the jobs. | + | * MAKE_OPTS - options to pass to the make command that runs the jobs. |
| * BAM_DEPEND - set to TRUE if you want the BAM file to be included as a make dependency | | * BAM_DEPEND - set to TRUE if you want the BAM file to be included as a make dependency |
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