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524 bytes added ,  15:41, 16 January 2012
Line 49: Line 49:  
     user@host:~$ head match.txt  
 
     user@host:~$ head match.txt  
    +
    #id1 gives the nth row variants of file A
 +
    #id2 gives the nth row variants of file B
 +
    #match_type denotes the match classification per match pair
 +
    #extended_no_of_bases is the number of bases extended in the extension step
 +
    #normalized is is a binary stating whether normalization resulted in a more parsimonious representation of the alleles
 +
    #these fieldd allows one to look for certain signatures in matches that one might be interested in within the match.log file that contains all the matches made.
 
     id1 id2 match_type  extended_no_bases  normalized
 
     id1 id2 match_type  extended_no_bases  normalized
 
     A4  B1  SRSAN  0  1
 
     A4  B1  SRSAN  0  1
1,102

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