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Match logs written to match.log
Match logs written to match.log
#matching classifications
#SRSA : Same REF Same ALT
#SRDA : Same REF Different ALT
#SRDNA : Same REF Different Number ALT
#DRDA : Different REF Different ALT
#DRDNA : Different REF Different Number ALT
user@host:~$ head match.txt
user@host:~$ head match.txt
#match_type denotes the match classification per match pair
#match_type denotes the match classification per match pair
#extended_no_of_bases is the number of bases extended in the extension step
#extended_no_of_bases is the number of bases extended in the extension step
#normalized is is a binary stating whether normalization resulted in a more parsimonious representation of the alleles
#normalized is is a binary stating whether normalization resulted in a more
#these fieldd allows one to look for certain signatures in matches that one might be interested in within the match.log file that contains all the matches made.
#parsimonious representation of the alleles
#these fields allows one to look for certain signatures in matches that one might
#be interested in within the match.log file that contains all the matches made.
id1 id2 match_type extended_no_bases normalized
id1 id2 match_type extended_no_bases normalized
A4 B1 SRSAN 0 1
A4 B1 SRSAN 0 1
