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18 bytes removed
, 16:06, 12 April 2010
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| | Returns the BAM block size of the record. | | | Returns the BAM block size of the record. |
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− | | <code>const char* SamRecord::getReferenceName(SamFileHeader& header)</code> | + | | <code>const char* SamRecord::getReferenceName()</code> |
| | Returns the reference sequence name (SAM format). | | | Returns the reference sequence name (SAM format). |
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| | Returns the length of the read. | | | Returns the length of the read. |
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− | | <code>const char* SamRecord::getMateReferenceName(SamFileHeader& header)</code> | + | | <code>const char* SamRecord::getMateReferenceName()</code> |
| | Returns the mate reference sequence name (SAM format). Returns the mate reference sequence name even if it is the same as the reference sequence name. | | | Returns the mate reference sequence name (SAM format). Returns the mate reference sequence name even if it is the same as the reference sequence name. |
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− | | <code>const char* SamRecord::getMateReferenceNameOrEqual(SamFileHeader& header)</code> | + | | <code>const char* SamRecord::getMateReferenceNameOrEqual()</code> |
− | | Returns the mate reference sequence name (SAM format). Returns the mate reference sequence name, unless it is the same as the reference sequence name, then an "=" is returned.. | + | | Returns the mate reference sequence name (SAM format). Returns the mate reference sequence name, unless it is the same as the reference sequence name, then an "=" is returned, unless the name is "*", then "*" is returned. |
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| | <code>int32_t SamRecord::getMateReferenceID()</code> | | | <code>int32_t SamRecord::getMateReferenceID()</code> |