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, 14:01, 7 September 2011
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| == FastQ Sequence Validation Criteria == | | == FastQ Sequence Validation Criteria == |
− | {| class="wikitable" style="width:100%" | + | |
| + | The following validation criteria is used by [[C++ Class: FastQFile|FastQFile class]] and the [[fastQValidator|the FastQ Validator Program]] when reading a FastQ Sequence |
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| + | {| class="wikitable" style="width:100%" border="1" |
| |+ style="font-size:150%" |'''Sequence Identifier Line''' | | |+ style="font-size:150%" |'''Sequence Identifier Line''' |
| ! width="50%"|Validation Criteria | | ! width="50%"|Validation Criteria |
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| | All characters in the base sequence must be in the allowable set specified via configuration. | | | All characters in the base sequence must be in the allowable set specified via configuration. |
| * Base Only: A C T G N a c t g n | | * Base Only: A C T G N a c t g n |
− | * Color Space Only: 0 1 2 3 .(period) | + | * Color Space Only: 0 1 2 3 .(period) Color Space files must start with a 1 character primer base. |
| | ERROR on Line <current line #>: Invalid character ('<invalid char>') in base sequence. | | | ERROR on Line <current line #>: Invalid character ('<invalid char>') in base sequence. |
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