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, 17:09, 17 December 2014
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| Main Workshop wiki page: [[SeqShop: December 2014]] | | Main Workshop wiki page: [[SeqShop: December 2014]] |
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− | See the [[Media:Seqshop cnv partb 2014 06.pdf|introductory slides]] for an intro to this tutorial. | + | See [[Media:Seqshop cnv partb 2014 06.pdf|lecture slides]] for the lecture slides associated with this tutorial. |
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| == Goals of This Session == | | == Goals of This Session == |
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| == Setup in person at the SeqShop Workshop == | | == Setup in person at the SeqShop Workshop == |
| ''This section is specifically for the SeqShop Workshop computers.'' | | ''This section is specifically for the SeqShop Workshop computers.'' |
− | <div class="mw-collapsible" style="width:600px"> | + | <div class="mw-collapsible mw-collapsed" style="width:600px"> |
| ''If you are not running during the SeqShop Workshop, please skip this section.'' | | ''If you are not running during the SeqShop Workshop, please skip this section.'' |
| <div class="mw-collapsible-content"> | | <div class="mw-collapsible-content"> |
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| <div class="mw-collapsible-content" style="width:800px"> | | <div class="mw-collapsible-content" style="width:800px"> |
| 7 COHERENCE;COVERAGE;DEPTH;DEPTHPVAL | | 7 COHERENCE;COVERAGE;DEPTH;DEPTHPVAL |
− | 17 COHERENCE;COVERAGE;DEPTH;DEPTHPVAL;PAIRSPERSAMPLE | + | 18 COHERENCE;COVERAGE;DEPTH;DEPTHPVAL;PAIRSPERSAMPLE |
| 3 COHERENCE;COVERAGE;DEPTH;PAIRSPERSAMPLE | | 3 COHERENCE;COVERAGE;DEPTH;PAIRSPERSAMPLE |
| 2 COHERENCE;COVERAGE;DEPTHPVAL;PAIRSPERSAMPLE | | 2 COHERENCE;COVERAGE;DEPTHPVAL;PAIRSPERSAMPLE |
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| 2 COVERAGE;DEPTH;PAIRSPERSAMPLE | | 2 COVERAGE;DEPTH;PAIRSPERSAMPLE |
| 4 COVERAGE;DEPTHPVAL | | 4 COVERAGE;DEPTHPVAL |
− | 5 COVERAGE;DEPTHPVAL;PAIRSPERSAMPLE | + | 4 COVERAGE;DEPTHPVAL;PAIRSPERSAMPLE |
| 5 COVERAGE;PAIRSPERSAMPLE | | 5 COVERAGE;PAIRSPERSAMPLE |
| </div> | | </div> |
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| </div> | | </div> |
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− | == Starting SNP Call on your own Genome == | + | |
− | Go to [[SeqShop: Calling Your Own Genome, December 2014]] so we can run SNP calling overnight.
| + | == Return to Workshop Wiki Page == |
| + | Return to main workshop wiki page: [[SeqShop: December 2014]] |