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165 bytes added ,  13:03, 3 February 2015
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   complete header.  Simply provide a header file stub named as <vcf-file>.hdr and vt
 
   complete header.  Simply provide a header file stub named as <vcf-file>.hdr and vt
 
   will automatically read it instead of the original header in <vcf-file>.
 
   will automatically read it instead of the original header in <vcf-file>.
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== Ploidy and Alleles ==
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  I am trying to make vt handle general cases of ploidy and alleles.  Please let me know if that is lacking in a tool that you are using.
    
= VCF Manipulation =
 
= VCF Manipulation =
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