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, 00:14, 20 May 2010
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| '''Example of testCases.dat file''' | | '''Example of testCases.dat file''' |
− | <code> | + | <source> |
| Z zygosity | | Z zygosity |
− | </code> | + | </source> |
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| In this case, the data file simply indicates that the five canonical columns in the pedigree (family id, individual id, father, mother and sex) will be followed by a column indicated whether individuals are MZ twins. | | In this case, the data file simply indicates that the five canonical columns in the pedigree (family id, individual id, father, mother and sex) will be followed by a column indicated whether individuals are MZ twins. |
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| '''Example of testCases.ped file''' | | '''Example of testCases.ped file''' |
− | <code> | + | <source> |
| MZTWIN 1 0 0 1 0 | | MZTWIN 1 0 0 1 0 |
| MZTWIN 2 0 0 2 0 | | MZTWIN 2 0 0 2 0 |
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| UNRELATED TEST1 0 0 1 0 | | UNRELATED TEST1 0 0 1 0 |
| UNRELATED TEST2 0 0 2 0 | | UNRELATED TEST2 0 0 2 0 |
− | </code> | + | </source> |
| | | |
| In this case, the pedigree describes 6 alternate relationships (identical twins, siblings, half-siblings, avuncular pairs, parent-offspring pairs and unrelated individuals). In each putative relationship, the placement of the individuals being evaluated is indicated by the TEST1 and TEST2 tags. | | In this case, the pedigree describes 6 alternate relationships (identical twins, siblings, half-siblings, avuncular pairs, parent-offspring pairs and unrelated individuals). In each putative relationship, the placement of the individuals being evaluated is indicated by the TEST1 and TEST2 tags. |