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8 bytes added ,  00:14, 20 May 2010
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'''Example of testCases.dat file'''
 
'''Example of testCases.dat file'''
<code>
+
<source>
 
Z zygosity
 
Z zygosity
</code>
+
</source>
    
In this case, the data file simply indicates that the five canonical columns in the pedigree (family id, individual id, father, mother and sex) will be followed by a column indicated whether individuals are MZ twins.
 
In this case, the data file simply indicates that the five canonical columns in the pedigree (family id, individual id, father, mother and sex) will be followed by a column indicated whether individuals are MZ twins.
    
'''Example of testCases.ped file'''
 
'''Example of testCases.ped file'''
<code>
+
<source>
 
MZTWIN        1  0    0    1  0
 
MZTWIN        1  0    0    1  0
 
MZTWIN        2  0    0    2  0
 
MZTWIN        2  0    0    2  0
Line 72: Line 72:  
UNRELATED TEST1  0    0    1  0
 
UNRELATED TEST1  0    0    1  0
 
UNRELATED TEST2  0    0    2  0
 
UNRELATED TEST2  0    0    2  0
</code>
+
</source>
    
In this case, the pedigree describes 6 alternate relationships (identical twins, siblings, half-siblings, avuncular pairs, parent-offspring pairs and unrelated individuals). In each putative relationship, the placement of the individuals being evaluated is indicated by the TEST1 and TEST2 tags.
 
In this case, the pedigree describes 6 alternate relationships (identical twins, siblings, half-siblings, avuncular pairs, parent-offspring pairs and unrelated individuals). In each putative relationship, the placement of the individuals being evaluated is indicated by the TEST1 and TEST2 tags.

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