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, 09:25, 27 June 2016
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| === Locations of Files === | | === Locations of Files === |
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| + | * List of Sample Numbers |
| + | ** |
| + | * Recalibrated and deduced BAM Files (can be found in the following locations) |
| + | ** /net/sardinia/progenia/SardiNIA/Pula_Final/BAMS/by_sample/*.bam |
| + | ** /net/sardinia/progenia/SardiNIA/recal_20150210/*.recal.bam |
| + | ** /net/sardinia/progenia/SardiNIA/recal_20150330/*.recal.bam |
| + | ** /net/mrtoad/stuff.from.csgspare/gpistis/Deduped_recalibrated_BAMS/*.uniq.dedup.recal.bam |
| + | ** /net/sardinia/progenia/SardiNIA/bams/decoy_ref/by_sample/*.bam |
| + | ** /net/sardinia/progenia/SardiNIA/VariantCalling_20150330/RealigningCarlosSamples/Giorgio_Carlo_merged_20150412/*.CG.recal.merged.bam (some BAM files were generated by Carlo and Giorgio separately for the same individual. These BAMs were merged, recalibrated, and deduped and can be found here) |
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| === What is Complete === | | === What is Complete === |