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, 18:06, 11 July 2017
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| '''<sup>†</sup>''' Binary executables are NOT guaranteed to run on every LINUX machine. Please compile from source files if you have trouble with the executable, or clone from the [https://github.com/Santy-8128/DosageConvertor github repository]. Else contact the author [mailto:sayantan@umich.edu Sayantan Das]. | | '''<sup>†</sup>''' Binary executables are NOT guaranteed to run on every LINUX machine. Please compile from source files if you have trouble with the executable, or clone from the [https://github.com/Santy-8128/DosageConvertor github repository]. Else contact the author [mailto:sayantan@umich.edu Sayantan Das]. |
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− | = Usage= | + | = Installation = |
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| Users should follow the following steps to compile '''DosageConvertor ''' (if they downloaded the source files). | | Users should follow the following steps to compile '''DosageConvertor ''' (if they downloaded the source files). |
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| make | | make |
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| + | |
| + | = Usage= |
| == Convert to PLINK Files == | | == Convert to PLINK Files == |
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| ./DosageConvertor --vcfDose TestDataImputedVCF.dose.vcf.gz | | ./DosageConvertor --vcfDose TestDataImputedVCF.dose.vcf.gz |
− | --info TestDataImputedVCF.info (NOT mandatory) | + | --info TestDataImputedVCF.info (optional) |
| --prefix OutPrefix | | --prefix OutPrefix |
| --type plink (default) | | --type plink (default) |
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| ./DosageConvertor --vcfDose TestDataImputedVCF.dose.vcf.gz | | ./DosageConvertor --vcfDose TestDataImputedVCF.dose.vcf.gz |
− | --info TestDataImputedVCF.info (NOT mandatory) | + | --info TestDataImputedVCF.info (optional) |
| --prefix OutPrefix | | --prefix OutPrefix |
| --type mach | | --type mach |