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<pre>--metal your_data --hits file_with_snps
<pre>--metal your_data --hits file_with_snps
</pre>
</pre>
=== Use 1000 genomes, CEU for LD instead of the default ===
=== Use 1000 genomes, CEU for LD instead of the default (HapMap r22 CEU) ===
<code></code>
<code></code>
<pre>--metal your_data --refsnp rs11899863 --source 1000G
<pre>--metal your_data --refsnp rs11899863 --source 1000G
</pre>
</pre>
=== Use hapmap YRI for LD ===
=== Use hapmap YRI for LD ===
